Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Tubd1-202ENSMUST00000069503 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm12183-201ENSMUST00000120566 1848 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Tnip3-208ENSMUST00000212402 1577 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm38246-201ENSMUST00000194318 1511 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm5065-201ENSMUST00000056639 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Slc50a1-202ENSMUST00000107460 785 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm14855-201ENSMUST00000119925 192 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm24597-201ENSMUST00000122503 300 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm13377-201ENSMUST00000137984 683 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm13548-201ENSMUST00000144688 385 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm15179-202ENSMUST00000152799 671 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Ear-ps10-201ENSMUST00000161871 460 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm3102-201ENSMUST00000164236 489 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm17064-201ENSMUST00000167690 452 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm26194-201ENSMUST00000175036 71 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm22111-201ENSMUST00000178010 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm23687-201ENSMUST00000178664 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm24566-201ENSMUST00000179286 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm23305-201ENSMUST00000179342 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm26389-201ENSMUST00000179819 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm22130-201ENSMUST00000179979 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm22393-201ENSMUST00000180153 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm25085-201ENSMUST00000180298 79 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm29441-201ENSMUST00000191584 211 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm17952-201ENSMUST00000193914 747 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm10416-201ENSMUST00000197379 645 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm42557-201ENSMUST00000202037 582 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm44033-201ENSMUST00000203699 695 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm44928-201ENSMUST00000208098 128 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm18292-201ENSMUST00000216673 919 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 AC133189.3-201ENSMUST00000226269 878 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm14267-205ENSMUST00000226697 1299 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 AC137117.2-201ENSMUST00000228560 282 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm21957-201ENSMUST00000073056 438 ntBASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Klf10-201ENSMUST00000074043 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim39Q9ESN2 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC7.9□□□□□ -1.15
Trim39Q9ESN2 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim39Q9ESN2 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms