Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm25265-201ENSMUST00000158520 347 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Traj54-201ENSMUST00000165071 54 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm6838-201ENSMUST00000172851 582 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm8004-201ENSMUST00000187782 617 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm5708-201ENSMUST00000196289 886 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm43815-201ENSMUST00000197676 990 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm43235-201ENSMUST00000200121 297 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm18995-201ENSMUST00000202981 520 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm33096-201ENSMUST00000210189 493 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cchcr1Q8K2I2 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cchcr1Q8K2I2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Mir704-201ENSMUST00000102106 77 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm24071-201ENSMUST00000104520 132 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm41-201ENSMUST00000116183 1023 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm25721-201ENSMUST00000157496 171 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm37247-201ENSMUST00000192549 730 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm37339-201ENSMUST00000194142 392 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm8667-201ENSMUST00000211112 449 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 BC085271-201ENSMUST00000191852 1487 ntBASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.96□□□□□ -0.98
Cchcr1Q8K2I2 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm14891-201ENSMUST00000117378 596 ntBASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.95□□□□□ -0.98
Cchcr1Q8K2I2 Gm7910-201ENSMUST00000117896 835 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms