Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smarcc2Q6PDG5 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smarcc2Q6PDG5 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smarcc2Q6PDG5 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smarcc2Q6PDG5 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Smarcc2Q6PDG5 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Mir1968-201ENSMUST00000157429 68 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm26269-201ENSMUST00000180144 126 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm8304-201ENSMUST00000185744 584 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm5251-201ENSMUST00000188959 472 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm45072-201ENSMUST00000208673 929 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm4898-201ENSMUST00000218519 832 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm5316-201ENSMUST00000050391 270 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.98□□□□□ -0.97
Smarcc2Q6PDG5 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm25167-201ENSMUST00000104188 120 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm14824-201ENSMUST00000119421 737 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm14913-201ENSMUST00000120011 1093 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm15049-201ENSMUST00000120474 463 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Defa-ps10-201ENSMUST00000121649 171 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm12634-201ENSMUST00000122157 992 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm15171-201ENSMUST00000122191 334 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm23117-201ENSMUST00000158482 108 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Traj54-201ENSMUST00000165071 54 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm29013-201ENSMUST00000187431 237 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 CT025552.1-201ENSMUST00000224561 521 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm6807-201ENSMUST00000077435 888 ntBASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc2Q6PDG5 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms