Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Rasgrp1-205ENSMUST00000173541 2283 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Tmx2-201ENSMUST00000053664 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gsta3-201ENSMUST00000027067 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm37315-201ENSMUST00000194347 3479 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Bank1-205ENSMUST00000198206 2538 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm43041-201ENSMUST00000200022 2630 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm14480-201ENSMUST00000118521 433 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm13500-201ENSMUST00000119348 824 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm12642-201ENSMUST00000121098 876 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm6451-201ENSMUST00000121488 717 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.92□□□□□ -1.3
Col8a1Q00780 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm16129-201ENSMUST00000152628 486 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm24442-201ENSMUST00000157238 327 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm23762-201ENSMUST00000158348 106 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm5327-201ENSMUST00000182864 1009 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm18301-201ENSMUST00000185261 888 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm6750-201ENSMUST00000189273 268 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm38030-201ENSMUST00000192376 475 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm37539-201ENSMUST00000192644 235 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm18597-201ENSMUST00000209519 694 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm19810-201ENSMUST00000218521 251 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm21941-201ENSMUST00000221121 562 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 CT025630.3-201ENSMUST00000228798 835 ntBASIC6.92□□□□□ -1.3
Col8a1Q00780 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.92□□□□□ -1.3
Col8a1Q00780 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Gm16239-201ENSMUST00000160182 2635 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col8a1Q00780 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms