Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Traf1P39428 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.98□□□□□ -0.97
Traf1P39428 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.98□□□□□ -0.97
Traf1P39428 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Traf1P39428 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.98□□□□□ -0.97
Traf1P39428 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.98□□□□□ -0.97
Traf1P39428 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Traf1P39428 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Traf1P39428 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm13252-201ENSMUST00000119355 321 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm14824-201ENSMUST00000119421 737 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm4773-201ENSMUST00000120392 702 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.97□□□□□ -0.97
Traf1P39428 Gm7418-201ENSMUST00000162120 801 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Gm28006-201ENSMUST00000183841 122 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm44245-201ENSMUST00000204304 232 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Gm45074-201ENSMUST00000209091 1240 ntBASIC8.97□□□□□ -0.97
Traf1P39428 AC122305.2-201ENSMUST00000215148 834 ntBASIC8.97□□□□□ -0.97
Traf1P39428 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.97□□□□□ -0.97
Traf1P39428 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.97□□□□□ -0.97
Traf1P39428 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Traf1P39428 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.97□□□□□ -0.97
Traf1P39428 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Traf1P39428 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Traf1P39428 Gm42656-201ENSMUST00000201506 2305 ntBASIC8.97□□□□□ -0.97
Traf1P39428 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
Traf1P39428 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.96□□□□□ -0.97
Traf1P39428 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.96□□□□□ -0.97
Traf1P39428 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.96□□□□□ -0.97
Traf1P39428 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Traf1P39428 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Traf1P39428 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Traf1P39428 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Gm7129-201ENSMUST00000117402 997 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Gm11383-201ENSMUST00000121346 807 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.96□□□□□ -0.98
Traf1P39428 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Traf1P39428 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.96□□□□□ -0.98
Traf1P39428 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.96□□□□□ -0.98
Traf1P39428 Gm42767-201ENSMUST00000198583 632 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.96□□□□□ -0.98
Traf1P39428 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.96□□□□□ -0.98
Traf1P39428 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.96□□□□□ -0.98
Traf1P39428 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Traf1P39428 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Traf1P39428 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Traf1P39428 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms