Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm43247-201ENSMUST00000198638 481 ntBASIC8.18□□□□□ -1.1
Usp4P35123 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm45401-201ENSMUST00000209456 733 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm45712-201ENSMUST00000212417 335 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Usp4P35123 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 AC154252.1-201ENSMUST00000226041 473 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp4P35123 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp4P35123 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm5619-201ENSMUST00000071172 760 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp4P35123 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Usp4P35123 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm37258-201ENSMUST00000191734 1627 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Gm7831-201ENSMUST00000117990 552 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm2214-201ENSMUST00000121333 330 ntBASIC8.17□□□□□ -1.1
Usp4P35123 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm17051-201ENSMUST00000170787 487 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm4246-201ENSMUST00000172822 216 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm28546-201ENSMUST00000188221 615 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm21301-201ENSMUST00000189476 699 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm18985-201ENSMUST00000196472 1079 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm42431-201ENSMUST00000196880 323 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp4P35123 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm45845-201ENSMUST00000207326 582 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.17□□□□□ -1.1
Usp4P35123 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Gm26264-201ENSMUST00000083278 159 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Snora74a-201ENSMUST00000083715 196 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Usp4P35123 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.17□□□□□ -1.1
Usp4P35123 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp4P35123 Gm45177-201ENSMUST00000209104 2307 ntBASIC8.17□□□□□ -1.1
Usp4P35123 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp4P35123 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
Usp4P35123 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp4P35123 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
Usp4P35123 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.16□□□□□ -1.1
Usp4P35123 Gm371-201ENSMUST00000142240 1245 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Gm22811-201ENSMUST00000157468 154 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Gm17097-201ENSMUST00000166414 714 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC8.16□□□□□ -1.1
Usp4P35123 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Gm29143-201ENSMUST00000189462 201 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Gm18988-201ENSMUST00000205601 746 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms