Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm8832-201ENSMUST00000119890 395 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm15028-201ENSMUST00000120295 370 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm12634-201ENSMUST00000122157 992 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm15727-201ENSMUST00000122416 437 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC6.11□□□□□ -1.43
Sdc1P18828 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm24078-201ENSMUST00000158184 103 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm26174-201ENSMUST00000158415 219 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm17147-201ENSMUST00000164176 432 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm18828-201ENSMUST00000180475 857 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm43471-201ENSMUST00000197550 467 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm44245-201ENSMUST00000204304 232 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sdc1P18828 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm42651-201ENSMUST00000199851 1339 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Sdc1P18828 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm13682-201ENSMUST00000117524 702 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm11796-201ENSMUST00000120208 972 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm12124-201ENSMUST00000120504 679 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm11343-201ENSMUST00000120579 599 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm13622-201ENSMUST00000120658 433 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm24083-201ENSMUST00000175174 120 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm5335-201ENSMUST00000182995 1000 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm29362-201ENSMUST00000187898 133 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gm8850-201ENSMUST00000195316 588 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC6.1□□□□□ -1.43
Sdc1P18828 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.1□□□□□ -1.43
Sdc1P18828 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 AC158531.1-201ENSMUST00000224617 457 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 AC153153.1-201ENSMUST00000225803 793 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sdc1P18828 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms