Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 AC122346.1-202ENSMUST00000225586 2116 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 AC154806.5-202ENSMUST00000227217 1443 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm22927-201ENSMUST00000104268 131 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm15209-201ENSMUST00000117703 400 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm11833-201ENSMUST00000118393 853 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm12421-201ENSMUST00000119071 307 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm14911-201ENSMUST00000120803 989 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm11585-201ENSMUST00000120901 569 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm14212-201ENSMUST00000122023 826 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx1P18111 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx1P18111 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm6586-201ENSMUST00000167028 643 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm6723-201ENSMUST00000180449 441 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm26980-201ENSMUST00000183321 395 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm9531-202ENSMUST00000183511 775 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Mir6239-201ENSMUST00000183564 105 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm27353-201ENSMUST00000184712 122 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm8510-201ENSMUST00000189202 895 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm20936-201ENSMUST00000191049 658 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm18060-201ENSMUST00000207407 564 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm45756-201ENSMUST00000212491 407 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 AC124577.1-201ENSMUST00000214044 487 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm5173-201ENSMUST00000219616 950 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm8153-201ENSMUST00000219844 952 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 AC160930.2-201ENSMUST00000226608 303 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 AC154598.2-201ENSMUST00000227114 604 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm6187-201ENSMUST00000040649 960 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx1P18111 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx1P18111 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.24□□□□□ -1.41
Cdx1P18111 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx1P18111 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms