Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm13750-201ENSMUST00000117621 465 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm25435-201ENSMUST00000158277 267 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm38131-201ENSMUST00000192449 430 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Mir6994-201ENSMUST00000198985 73 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm28720-201ENSMUST00000190728 3156 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm2136-201ENSMUST00000193945 2577 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm22272-201ENSMUST00000104039 134 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm7115-201ENSMUST00000193706 832 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm44604-201ENSMUST00000205475 496 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Mir412-201ENSMUST00000083636 80 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Cblb-205ENSMUST00000227756 3378 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm15766-201ENSMUST00000118025 813 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm18348-201ENSMUST00000191227 820 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm45828-201ENSMUST00000206938 1836 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm12643-201ENSMUST00000116078 374 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm3943-201ENSMUST00000118606 718 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm12271-201ENSMUST00000121719 414 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm25459-201ENSMUST00000157953 114 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col6a3E9PWQ3 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm9238-201ENSMUST00000196181 329 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms