Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm42965-201ENSMUST00000201254 250 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm18765-201ENSMUST00000203166 660 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm4120-201ENSMUST00000220456 578 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm24046-201ENSMUST00000083111 165 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm12727-201ENSMUST00000119885 359 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Upk3aQ9JKX8 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Upk3aQ9JKX8 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.34□□□□□ -1.24
Upk3aQ9JKX8 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Upk3aQ9JKX8 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Upk3aQ9JKX8 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Upk3aQ9JKX8 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 CT009515.4-201ENSMUST00000228165 1494 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm12344-201ENSMUST00000117087 329 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm16221-201ENSMUST00000117331 393 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm4835-201ENSMUST00000155839 972 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Mir3072-201ENSMUST00000175610 83 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm5445-201ENSMUST00000180224 480 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms