Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm38336-201ENSMUST00000193040 2549 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm12365-201ENSMUST00000117931 568 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm13163-201ENSMUST00000119875 336 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm26401-201ENSMUST00000158502 76 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm26269-201ENSMUST00000180144 126 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm5181-201ENSMUST00000183140 971 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm28503-201ENSMUST00000185966 147 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm43040-201ENSMUST00000202399 558 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm45269-201ENSMUST00000210359 282 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm7839-201ENSMUST00000210755 673 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm29807-201ENSMUST00000220161 372 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm46436-201ENSMUST00000221851 1294 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 St7-201ENSMUST00000000674 1818 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm44986-201ENSMUST00000206292 2829 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Hmgcs1-201ENSMUST00000179869 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm37873-201ENSMUST00000194571 2280 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm25916-201ENSMUST00000104263 131 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm24986-201ENSMUST00000104452 132 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm13121-201ENSMUST00000120637 632 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Rpl37rt-202ENSMUST00000124641 294 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm23587-201ENSMUST00000157658 84 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm17235-201ENSMUST00000169128 964 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm24300-201ENSMUST00000177809 109 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm24017-201ENSMUST00000178726 109 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm23952-201ENSMUST00000179380 109 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm26929-201ENSMUST00000182703 753 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm9142-201ENSMUST00000187161 955 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm37989-201ENSMUST00000195202 803 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm43711-201ENSMUST00000195994 373 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm44243-201ENSMUST00000204323 692 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms