Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm44746-201ENSMUST00000205565 1349 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm25317-201ENSMUST00000116824 129 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm5406-201ENSMUST00000120054 766 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm26351-201ENSMUST00000157532 232 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm25455-201ENSMUST00000157946 325 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm26607-201ENSMUST00000180661 867 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28980-201ENSMUST00000187877 219 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm28864-201ENSMUST00000189251 644 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm37506-201ENSMUST00000192008 143 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm44561-201ENSMUST00000208869 264 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 AC152922.1-201ENSMUST00000216518 1232 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Gm25259-201ENSMUST00000083048 193 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.38□□□□□ -1.23
Clrn1Q8K445 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Clrn1Q8K445 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Dgkh-206ENSMUST00000228362 3308 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm38195-201ENSMUST00000194247 1499 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm12851-201ENSMUST00000117920 421 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm15753-201ENSMUST00000119241 1062 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm9392-201ENSMUST00000119337 554 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm11203-201ENSMUST00000122169 741 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm25318-201ENSMUST00000122554 314 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm25372-201ENSMUST00000158161 255 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Mir6930-201ENSMUST00000183859 68 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms