Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 AC102582.1-201ENSMUST00000215376 378 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 AC139941.1-201ENSMUST00000221517 478 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm43670-201ENSMUST00000199047 1767 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm5841-201ENSMUST00000195307 2177 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm44752-201ENSMUST00000207140 3305 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm13352-201ENSMUST00000117515 262 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm14053-201ENSMUST00000121662 470 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm371-201ENSMUST00000142240 1245 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm25437-201ENSMUST00000158282 132 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm7418-201ENSMUST00000162120 801 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm4781-201ENSMUST00000167995 781 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Ighv1-17-201ENSMUST00000194435 350 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm37585-201ENSMUST00000195440 280 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Mir7230-201ENSMUST00000195977 56 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Olfr471-201ENSMUST00000210091 936 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm7239-201ENSMUST00000220981 860 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 AC130219.2-201ENSMUST00000228765 807 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm5815-201ENSMUST00000050706 1185 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.03□□□□□ -0.96
Nup88Q8CEC0 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nup88Q8CEC0 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nup88Q8CEC0 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Nup88Q8CEC0 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nup88Q8CEC0 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nup88Q8CEC0 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm23706-201ENSMUST00000104369 82 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm12687-201ENSMUST00000119752 706 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm6798-201ENSMUST00000119961 360 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm22915-201ENSMUST00000157615 136 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm27019-201ENSMUST00000183056 404 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm6610-201ENSMUST00000186324 358 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm2287-201ENSMUST00000197417 1084 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm42573-201ENSMUST00000202327 478 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm8575-201ENSMUST00000210262 521 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms