Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm5111-201ENSMUST00000064744 964 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 AC129336.1-201ENSMUST00000220224 2277 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm13732-201ENSMUST00000117753 535 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm12851-201ENSMUST00000117920 421 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm12517-201ENSMUST00000122082 425 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm23139-201ENSMUST00000179454 132 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm5350-201ENSMUST00000182057 1002 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm45734-201ENSMUST00000211916 411 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm16415-201ENSMUST00000080097 489 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm10619-202ENSMUST00000186073 3287 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm13890-201ENSMUST00000117578 390 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm11902-201ENSMUST00000118849 270 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm14712-201ENSMUST00000120195 772 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm13495-201ENSMUST00000121156 537 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm44538-201ENSMUST00000205615 348 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ifit1bl1-201ENSMUST00000112467 2193 ntAPPRIS P5 TSL 3 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 CT009757.2-201ENSMUST00000220806 2028 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Tex11-203ENSMUST00000113718 3278 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm17229-202ENSMUST00000166792 1753 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm13772-201ENSMUST00000118431 317 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm13726-201ENSMUST00000121278 794 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms