Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.15□□□□□ -1.11
CtifQ6PEE2 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm25092-201ENSMUST00000103996 129 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm24665-201ENSMUST00000104160 129 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm23266-201ENSMUST00000104444 134 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm11662-201ENSMUST00000121389 1193 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm12754-201ENSMUST00000121908 454 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm11203-201ENSMUST00000122169 741 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 E130120K24Rik-201ENSMUST00000129910 556 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm23021-201ENSMUST00000158765 169 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm17149-201ENSMUST00000164712 375 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm17977-201ENSMUST00000198743 574 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm6562-201ENSMUST00000221903 464 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.14□□□□□ -1.11
CtifQ6PEE2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CtifQ6PEE2 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm13333-201ENSMUST00000119424 781 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm11796-201ENSMUST00000120208 972 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm13726-201ENSMUST00000121278 794 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm12634-201ENSMUST00000122157 992 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm22207-201ENSMUST00000158609 317 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm4252-201ENSMUST00000174823 313 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm9423-201ENSMUST00000183173 997 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm27972-201ENSMUST00000184720 137 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Mir6922-201ENSMUST00000185099 66 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm9729-201ENSMUST00000196364 265 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm45698-201ENSMUST00000208537 1135 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm45782-201ENSMUST00000212670 366 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm8689-201ENSMUST00000218709 712 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm25129-201ENSMUST00000082651 133 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm21051-201ENSMUST00000221757 1688 ntBASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CtifQ6PEE2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms