Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm19340-201ENSMUST00000221995 345 ntBASIC10.17□□□□□ -0.78
Nkx2-3P97334 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-3P97334 AC138604.2-201ENSMUST00000226620 921 ntBASIC10.17□□□□□ -0.78
Nkx2-3P97334 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-3P97334 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Zfp939-201ENSMUST00000061201 2131 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 AC121860.1-201ENSMUST00000227908 2787 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm25593-201ENSMUST00000102272 96 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm22152-201ENSMUST00000116966 125 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm28864-201ENSMUST00000189251 644 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm37741-201ENSMUST00000191768 1256 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm37337-201ENSMUST00000192601 993 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 AC167013.3-201ENSMUST00000228110 989 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm43623-201ENSMUST00000199289 2663 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-3P97334 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC10.16□□□□□ -0.78
Nkx2-3P97334 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-3P97334 Gm12834-201ENSMUST00000121855 2829 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm25725-201ENSMUST00000104528 130 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm11485-201ENSMUST00000120048 1175 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm13649-201ENSMUST00000122325 606 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm23426-201ENSMUST00000122483 318 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm22035-201ENSMUST00000157284 228 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm26487-201ENSMUST00000158022 94 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Olfr331-202ENSMUST00000170501 957 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm29492-201ENSMUST00000187124 457 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-3P97334 Gm28573-201ENSMUST00000187821 380 ntBASIC10.15□□□□□ -0.78
Nkx2-3P97334 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms