Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ybx1P62960 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm15933-201ENSMUST00000117215 616 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm15160-201ENSMUST00000120553 907 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm22025-201ENSMUST00000122734 302 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Mir1981-201ENSMUST00000157934 82 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm23116-201ENSMUST00000158481 67 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm27782-201ENSMUST00000185059 199 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm27596-201ENSMUST00000185061 83 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm28573-201ENSMUST00000187821 380 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm28145-201ENSMUST00000189742 380 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm29435-201ENSMUST00000191310 689 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm28400-201ENSMUST00000191332 380 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm7115-201ENSMUST00000193706 832 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.14□□□□□ -1.11
Ybx1P62960 AC167202.1-201ENSMUST00000219027 331 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ybx1P62960 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Ybx1P62960 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm43917-201ENSMUST00000191984 2360 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Gm37873-201ENSMUST00000194571 2280 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gm17821-201ENSMUST00000223448 1693 ntBASIC8.14□□□□□ -1.11
Ybx1P62960 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ybx1P62960 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.14□□□□□ -1.11
Ybx1P62960 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.14□□□□□ -1.11
Ybx1P62960 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm23706-201ENSMUST00000104369 82 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm11877-201ENSMUST00000118921 852 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm14186-201ENSMUST00000120804 137 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm6044-201ENSMUST00000121819 499 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm20111-201ENSMUST00000184830 319 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm5147-201ENSMUST00000185999 794 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm28864-201ENSMUST00000189251 644 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm18547-201ENSMUST00000192439 811 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Gm17838-201ENSMUST00000205872 876 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ybx1P62960 Gm5655-201ENSMUST00000221078 901 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC8.13□□□□□ -1.11
Ybx1P62960 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC8.13□□□□□ -1.11
Ybx1P62960 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.13□□□□□ -1.11
Ybx1P62960 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.13□□□□□ -1.11
Ybx1P62960 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ybx1P62960 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms