Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm14824-201ENSMUST00000119421 737 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm23663-201ENSMUST00000158045 80 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Tpm1P58771 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm27403-201ENSMUST00000184662 214 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm28864-201ENSMUST00000189251 644 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm9523-201ENSMUST00000199146 1159 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm20223-201ENSMUST00000199932 805 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm44245-201ENSMUST00000204304 232 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.42□□□□□ -1.06
Tpm1P58771 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 AC122774.1-201ENSMUST00000227703 762 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Tpm1P58771 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Mir484-201ENSMUST00000093566 67 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Tpm1P58771 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.42□□□□□ -1.06
Tpm1P58771 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.41□□□□□ -1.06
Tpm1P58771 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Tpm1P58771 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm13680-201ENSMUST00000119790 793 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm5698-201ENSMUST00000178317 724 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm26784-201ENSMUST00000181666 410 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm7560-201ENSMUST00000187748 873 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC8.41□□□□□ -1.06
Tpm1P58771 Mir7230-201ENSMUST00000195977 56 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm16273-201ENSMUST00000202238 268 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm18024-201ENSMUST00000218516 690 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Tpm1P58771 Mir486-201ENSMUST00000093576 128 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Tpm1P58771 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms