Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm22707-201ENSMUST00000103834 110 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm13900-201ENSMUST00000119402 498 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm8421-201ENSMUST00000119439 305 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm14787-201ENSMUST00000121236 388 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC11.63□□□□□ -0.55
Cux1P53564 Gm26784-201ENSMUST00000181666 410 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC11.63□□□□□ -0.55
Cux1P53564 Gm38254-201ENSMUST00000192276 1009 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC11.63□□□□□ -0.55
Cux1P53564 AC151904.2-201ENSMUST00000218683 1177 ntBASIC11.63□□□□□ -0.55
Cux1P53564 AC154904.1-201ENSMUST00000219510 312 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Gm24036-201ENSMUST00000082868 156 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cux1P53564 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cux1P53564 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cux1P53564 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cux1P53564 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cux1P53564 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cux1P53564 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC11.63□□□□□ -0.55
Cux1P53564 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cux1P53564 Gm38001-201ENSMUST00000192900 3761 ntBASIC11.63□□□□□ -0.55
Cux1P53564 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Gm10302-201ENSMUST00000174433 3535 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Gm17022-201ENSMUST00000166415 922 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Gm20128-201ENSMUST00000196189 417 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC11.62□□□□□ -0.55
Cux1P53564 CT025685.1-201ENSMUST00000213716 150 ntBASIC11.62□□□□□ -0.55
Cux1P53564 AC144783.1-201ENSMUST00000219103 960 ntBASIC11.62□□□□□ -0.55
Cux1P53564 AC165155.1-201ENSMUST00000228932 445 ntBASIC11.62□□□□□ -0.55
Cux1P53564 n-R5s29-201ENSMUST00000082836 119 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Gm12187-201ENSMUST00000119584 1375 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC11.62□□□□□ -0.55
Cux1P53564 Gm36993-201ENSMUST00000192983 2980 ntBASIC11.62□□□□□ -0.55
Cux1P53564 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cux1P53564 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cux1P53564 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cux1P53564 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cux1P53564 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 Gm26183-201ENSMUST00000157685 139 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Gm22882-201ENSMUST00000157749 124 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 Gm43546-201ENSMUST00000196721 943 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Gm43553-201ENSMUST00000200900 685 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Gm42713-201ENSMUST00000202709 945 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Gm45136-201ENSMUST00000205793 943 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Cux1P53564 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 AC159205.2-201ENSMUST00000223759 816 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC11.61□□□□□ -0.55
Cux1P53564 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cux1P53564 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cux1P53564 Gm45354-201ENSMUST00000199820 2557 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Gm20749-201ENSMUST00000186319 3492 ntBASIC11.61□□□□□ -0.55
Cux1P53564 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Cux1P53564 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cux1P53564 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cux1P53564 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cux1P53564 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cux1P53564 Gm15568-201ENSMUST00000118589 1213 ntBASIC11.6□□□□□ -0.55
Cux1P53564 Gm15007-201ENSMUST00000119982 710 ntBASIC11.6□□□□□ -0.55
Cux1P53564 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC11.6□□□□□ -0.55
Cux1P53564 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms