Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm15616-201ENSMUST00000118662 375 ntBASIC7.79□□□□□ -1.16
HttP42859 Gm12438-201ENSMUST00000122034 336 ntBASIC7.79□□□□□ -1.16
HttP42859 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
HttP42859 Mir3090-201ENSMUST00000175597 87 ntBASIC7.79□□□□□ -1.16
HttP42859 Gm26557-201ENSMUST00000180756 493 ntBASIC7.79□□□□□ -1.16
HttP42859 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm28918-201ENSMUST00000188822 699 ntBASIC7.79□□□□□ -1.16
HttP42859 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm7769-201ENSMUST00000212900 933 ntBASIC7.79□□□□□ -1.16
HttP42859 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.79□□□□□ -1.16
HttP42859 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm44080-201ENSMUST00000204451 2214 ntBASIC7.79□□□□□ -1.16
HttP42859 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HttP42859 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HttP42859 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.78□□□□□ -1.16
HttP42859 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.78□□□□□ -1.16
HttP42859 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.78□□□□□ -1.16
HttP42859 Gm10126-201ENSMUST00000221732 168 ntBASIC7.78□□□□□ -1.16
HttP42859 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.78□□□□□ -1.16
HttP42859 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HttP42859 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.78□□□□□ -1.16
HttP42859 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.78□□□□□ -1.16
HttP42859 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.78□□□□□ -1.16
HttP42859 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Gm8604-201ENSMUST00000183150 965 ntBASIC7.78□□□□□ -1.16
HttP42859 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HttP42859 Gm8581-201ENSMUST00000188636 890 ntBASIC7.78□□□□□ -1.16
HttP42859 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Gm18562-201ENSMUST00000209949 915 ntBASIC7.78□□□□□ -1.16
HttP42859 Gm9269-201ENSMUST00000221661 578 ntBASIC7.78□□□□□ -1.16
HttP42859 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.78□□□□□ -1.16
HttP42859 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Gm18262-201ENSMUST00000222560 1946 ntBASIC7.78□□□□□ -1.16
HttP42859 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.78□□□□□ -1.16
HttP42859 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HttP42859 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
HttP42859 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Gm45448-201ENSMUST00000211739 209 ntBASIC7.78□□□□□ -1.16
HttP42859 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.78□□□□□ -1.16
HttP42859 Gm4012-201ENSMUST00000221504 581 ntBASIC7.78□□□□□ -1.16
HttP42859 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
HttP42859 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HttP42859 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
HttP42859 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
HttP42859 Gm44437-201ENSMUST00000203832 4038 ntBASIC7.77□□□□□ -1.16
HttP42859 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Mir3097-201ENSMUST00000175356 67 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm26528-201ENSMUST00000181965 283 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm5272-201ENSMUST00000182730 982 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Gm36965-201ENSMUST00000193797 394 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.77□□□□□ -1.17
HttP42859 Gm35619-201ENSMUST00000222548 600 ntBASIC7.77□□□□□ -1.17
HttP42859 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.77□□□□□ -1.17
HttP42859 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
HttP42859 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms