Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm14863-201ENSMUST00000119648 307 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm25690-201ENSMUST00000175439 77 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm5261-201ENSMUST00000185860 713 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.91□□□□□ -0.98
Col1a1P11087 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm36928-201ENSMUST00000192466 694 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm37325-201ENSMUST00000194971 694 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.91□□□□□ -0.98
Col1a1P11087 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col1a1P11087 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col1a1P11087 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.91□□□□□ -0.98
Col1a1P11087 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col1a1P11087 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col1a1P11087 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col1a1P11087 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm11850-201ENSMUST00000119679 479 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Gm12321-201ENSMUST00000121485 804 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Gm3208-201ENSMUST00000168281 427 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm42767-201ENSMUST00000198583 632 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col1a1P11087 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm18789-201ENSMUST00000216115 550 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Gm46231-201ENSMUST00000220152 314 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col1a1P11087 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col1a1P11087 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Col1a1P11087 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col1a1P11087 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm44080-201ENSMUST00000204451 2214 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.9□□□□□ -0.98
Col1a1P11087 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col1a1P11087 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col1a1P11087 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.9□□□□□ -0.98
Col1a1P11087 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col1a1P11087 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.9□□□□□ -0.99
Col1a1P11087 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Col1a1P11087 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col1a1P11087 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
Col1a1P11087 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col1a1P11087 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm13798-201ENSMUST00000118285 139 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm14353-201ENSMUST00000122200 869 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Mir1930-201ENSMUST00000158799 84 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm16138-201ENSMUST00000159341 821 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Mir6241-201ENSMUST00000184225 103 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms