Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Hoxa4P06798 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm8644-201ENSMUST00000118619 596 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm14016-201ENSMUST00000119095 486 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm5575-201ENSMUST00000190879 398 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm42965-201ENSMUST00000201254 250 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm7151-201ENSMUST00000211511 954 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm6284-201ENSMUST00000209609 4287 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.61□□□□□ -1.19
Hoxa4P06798 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Hoxa4P06798 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Hoxa4P06798 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm24373-201ENSMUST00000104393 132 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm5761-201ENSMUST00000119238 834 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm12632-201ENSMUST00000121223 495 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm16523-201ENSMUST00000121253 592 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm23187-201ENSMUST00000175746 86 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm37392-201ENSMUST00000192098 516 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.6□□□□□ -1.19
Hoxa4P06798 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm9497-201ENSMUST00000199908 538 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Gm44001-201ENSMUST00000203158 3773 ntBASIC7.6□□□□□ -1.19
Hoxa4P06798 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Hoxa4P06798 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Hoxa4P06798 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Hoxa4P06798 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Hoxa4P06798 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.59□□□□□ -1.19
Hoxa4P06798 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm21043-201ENSMUST00000199316 1517 ntBASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm25725-201ENSMUST00000104528 130 ntBASIC7.59□□□□□ -1.19
Hoxa4P06798 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm16056-201ENSMUST00000119293 135 ntBASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.59□□□□□ -1.19
Hoxa4P06798 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.59□□□□□ -1.19
Hoxa4P06798 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Hoxa4P06798 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms