Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 AC154171.3-201ENSMUST00000224519 2505 ntBASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Dgkh-206ENSMUST00000228362 3308 ntBASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 Dalir-201ENSMUST00000188773 2170 ntBASIC13.86□□□□□ -0.19
Ccdc180J3QNE4 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm26419-201ENSMUST00000104272 133 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Ighv1-29-201ENSMUST00000194116 342 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm43849-201ENSMUST00000201086 215 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm43285-201ENSMUST00000196563 3592 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Retreg1-203ENSMUST00000226438 2783 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm40778-201ENSMUST00000217825 1344 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm18537-202ENSMUST00000206215 1503 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm26179-201ENSMUST00000177723 132 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Igkv4-77-201ENSMUST00000199410 352 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm17834-201ENSMUST00000204322 891 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 AC192091.1-201ENSMUST00000218668 439 ntBASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc180J3QNE4 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gm11474-201ENSMUST00000120814 277 ntBASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gm14531-201ENSMUST00000120845 285 ntBASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gm5791-201ENSMUST00000220840 489 ntBASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 AC131117.2-202ENSMUST00000224539 547 ntBASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc180J3QNE4 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc180J3QNE4 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc180J3QNE4 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc180J3QNE4 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm16056-201ENSMUST00000119293 135 ntBASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm17786-201ENSMUST00000182000 427 ntBASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm23734-201ENSMUST00000083753 109 ntBASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms