Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm15355-201ENSMUST00000118929 285 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm8865-201ENSMUST00000125697 430 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Mir6999-201ENSMUST00000183498 61 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm37108-201ENSMUST00000194605 626 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm19161-201ENSMUST00000217958 737 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm7086-202ENSMUST00000228849 506 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm4825-201ENSMUST00000079690 408 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm15047-201ENSMUST00000118891 454 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm25372-201ENSMUST00000158161 255 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm29462-201ENSMUST00000191458 288 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm43929-201ENSMUST00000203025 409 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 AC165260.5-201ENSMUST00000224640 1247 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.6□□□□□ -1.03
Ccdc38Q8CDN8 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm22271-201ENSMUST00000104035 128 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm13323-201ENSMUST00000120245 1151 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm13495-201ENSMUST00000121156 537 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Scarna17-201ENSMUST00000158064 79 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms