Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm32842-201ENSMUST00000212653 738 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Gm18243-201ENSMUST00000220756 887 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 AC163041.2-201ENSMUST00000223082 573 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trub1Q8C0D0 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm13352-201ENSMUST00000117515 262 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm11838-201ENSMUST00000121999 231 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm11895-201ENSMUST00000122165 467 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm22408-201ENSMUST00000174925 65 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm24576-201ENSMUST00000175508 248 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm26784-201ENSMUST00000181666 410 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm29175-201ENSMUST00000189500 402 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm29739-201ENSMUST00000191760 529 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Mir1897-202ENSMUST00000198006 79 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm42424-201ENSMUST00000198319 376 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm18207-201ENSMUST00000205486 526 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 AC160635.1-201ENSMUST00000216731 474 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Ermard-209ENSMUST00000226561 1019 ntBASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trub1Q8C0D0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Mir1983-201ENSMUST00000157523 132 ntBASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Gm15251-201ENSMUST00000177947 883 ntBASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.85□□□□□ -1.15
Trub1Q8C0D0 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Gm8529-201ENSMUST00000183298 745 ntBASIC7.85□□□□□ -1.15
Trub1Q8C0D0 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms