Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Pcdh19Q80TF3 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm38236-201ENSMUST00000192661 3229 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AC154634.1-201ENSMUST00000225225 2394 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm1988-201ENSMUST00000188190 2565 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm11433-201ENSMUST00000118318 228 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm13325-201ENSMUST00000118746 806 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm14156-201ENSMUST00000121538 483 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm15077-201ENSMUST00000122344 362 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm25271-201ENSMUST00000157273 290 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm43013-201ENSMUST00000198216 247 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm45255-201ENSMUST00000209943 811 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AL929285.1-201ENSMUST00000215522 229 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AC159263.2-201ENSMUST00000221593 411 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm10029-201ENSMUST00000089635 330 ntBASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdh19Q80TF3 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Gm42895-201ENSMUST00000200761 2996 ntBASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Gm7435-202ENSMUST00000216003 2424 ntBASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Pcdh19Q80TF3 Gm43311-201ENSMUST00000200016 2377 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms