Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm42696-201ENSMUST00000199859 1142 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm34701-201ENSMUST00000204213 849 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm33096-201ENSMUST00000210189 493 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ClpbQ60649 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
ClpbQ60649 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ClpbQ60649 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm44834-201ENSMUST00000206671 1396 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm25167-201ENSMUST00000104188 120 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm11969-201ENSMUST00000118848 356 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm11259-201ENSMUST00000120554 715 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm12583-201ENSMUST00000120677 853 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm22885-201ENSMUST00000157410 107 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm23533-201ENSMUST00000157540 245 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm26408-201ENSMUST00000157672 127 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm23117-201ENSMUST00000158482 108 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Mir7011-201ENSMUST00000183768 73 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm37339-201ENSMUST00000194142 392 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm26413-202ENSMUST00000198972 127 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm44743-201ENSMUST00000209062 386 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm6807-201ENSMUST00000077435 888 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm25259-201ENSMUST00000083048 193 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.43□□□□□ -1.22
ClpbQ60649 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ClpbQ60649 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ClpbQ60649 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ClpbQ60649 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ClpbQ60649 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
ClpbQ60649 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ClpbQ60649 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms