Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx4Q07424 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx4Q07424 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx4Q07424 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm43254-201ENSMUST00000199187 2491 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 AC132384.4-201ENSMUST00000220343 1397 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm25761-201ENSMUST00000103983 128 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm22271-201ENSMUST00000104035 128 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm14032-201ENSMUST00000117686 1026 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm16057-201ENSMUST00000120811 759 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm26407-201ENSMUST00000158504 307 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm17572-201ENSMUST00000171455 420 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm8974-201ENSMUST00000175770 479 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm9399-201ENSMUST00000175771 639 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Snhg7-201ENSMUST00000181621 139 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm29739-201ENSMUST00000191760 529 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm17970-201ENSMUST00000192199 685 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx4Q07424 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm37185-201ENSMUST00000193852 410 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 AC161250.1-201ENSMUST00000213426 1111 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 AC153532.1-201ENSMUST00000218126 1111 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 AC114585.2-203ENSMUST00000228400 339 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm5619-201ENSMUST00000071172 760 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Gm43792-201ENSMUST00000202492 2210 ntBASIC6.11□□□□□ -1.43
Cdx4Q07424 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx4Q07424 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx4Q07424 AC122887.1-201ENSMUST00000219265 2722 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms