Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
NcanP55066 Gm11474-201ENSMUST00000120814 277 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm5401-201ENSMUST00000122444 365 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
NcanP55066 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Gm22428-201ENSMUST00000158554 132 ntBASIC8.21□□□□□ -1.1
NcanP55066 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm27156-201ENSMUST00000184589 754 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm29562-201ENSMUST00000190113 904 ntBASIC8.21□□□□□ -1.1
NcanP55066 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.21□□□□□ -1.1
NcanP55066 Gm20128-201ENSMUST00000196189 417 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm42782-201ENSMUST00000197286 522 ntBASIC8.21□□□□□ -1.1
NcanP55066 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.21□□□□□ -1.1
NcanP55066 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC8.21□□□□□ -1.1
NcanP55066 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.21□□□□□ -1.1
NcanP55066 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.21□□□□□ -1.1
NcanP55066 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.21□□□□□ -1.1
NcanP55066 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
NcanP55066 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.21□□□□□ -1.1
NcanP55066 Gm26264-201ENSMUST00000083278 159 ntBASIC8.21□□□□□ -1.1
NcanP55066 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
NcanP55066 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
NcanP55066 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.21□□□□□ -1.1
NcanP55066 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.21□□□□□ -1.1
NcanP55066 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NcanP55066 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Gm232-201ENSMUST00000216549 2559 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm16536-201ENSMUST00000162209 1589 ntBASIC8.2□□□□□ -1.1
NcanP55066 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Gm6987-201ENSMUST00000119319 428 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm11198-201ENSMUST00000119771 974 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.2□□□□□ -1.1
NcanP55066 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.2□□□□□ -1.1
NcanP55066 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.2□□□□□ -1.1
NcanP55066 Mir7084-201ENSMUST00000183876 70 ntBASIC8.2□□□□□ -1.1
NcanP55066 Mir6986-201ENSMUST00000184483 58 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.2□□□□□ -1.1
NcanP55066 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.2□□□□□ -1.1
NcanP55066 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm43546-201ENSMUST00000196721 943 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.2□□□□□ -1.1
NcanP55066 Gm42713-201ENSMUST00000202709 945 ntBASIC8.2□□□□□ -1.1
NcanP55066 Gm45136-201ENSMUST00000205793 943 ntBASIC8.2□□□□□ -1.1
NcanP55066 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC8.2□□□□□ -1.1
NcanP55066 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 AC167013.3-201ENSMUST00000228110 989 ntBASIC8.2□□□□□ -1.1
NcanP55066 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.2□□□□□ -1.1
NcanP55066 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
NcanP55066 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.2□□□□□ -1.1
NcanP55066 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.2□□□□□ -1.1
NcanP55066 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
NcanP55066 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NcanP55066 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC8.2□□□□□ -1.1
NcanP55066 Gm7882-201ENSMUST00000177915 1762 ntBASIC8.2□□□□□ -1.1
NcanP55066 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms