Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC6.28□□□□□ -1.4
VhlP40338 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.28□□□□□ -1.4
VhlP40338 Gm8948-201ENSMUST00000216371 370 ntBASIC6.28□□□□□ -1.4
VhlP40338 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.28□□□□□ -1.4
VhlP40338 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VhlP40338 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VhlP40338 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Gm37210-201ENSMUST00000192484 2004 ntBASIC6.28□□□□□ -1.4
VhlP40338 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.28□□□□□ -1.4
VhlP40338 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VhlP40338 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.28□□□□□ -1.4
VhlP40338 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.28□□□□□ -1.4
VhlP40338 AC122878.1-201ENSMUST00000227716 1460 ntBASIC6.28□□□□□ -1.4
VhlP40338 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.27□□□□□ -1.4
VhlP40338 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
VhlP40338 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
VhlP40338 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
VhlP40338 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
VhlP40338 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VhlP40338 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VhlP40338 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.27□□□□□ -1.41
VhlP40338 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
VhlP40338 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gm45807-201ENSMUST00000209142 2874 ntBASIC6.27□□□□□ -1.41
VhlP40338 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Gm5228-201ENSMUST00000117186 357 ntBASIC6.27□□□□□ -1.41
VhlP40338 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.27□□□□□ -1.41
VhlP40338 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.27□□□□□ -1.41
VhlP40338 Gm6689-201ENSMUST00000130905 481 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm23497-201ENSMUST00000157738 130 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.27□□□□□ -1.41
VhlP40338 Gm8696-201ENSMUST00000174777 385 ntBASIC6.27□□□□□ -1.41
VhlP40338 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm5698-201ENSMUST00000178317 724 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm28864-201ENSMUST00000189251 644 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm29517-201ENSMUST00000190744 351 ntBASIC6.27□□□□□ -1.41
VhlP40338 Ighv8-16-201ENSMUST00000199258 294 ntBASIC6.27□□□□□ -1.41
VhlP40338 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm44203-201ENSMUST00000203134 307 ntBASIC6.27□□□□□ -1.41
VhlP40338 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Gm18024-201ENSMUST00000218516 690 ntBASIC6.27□□□□□ -1.41
VhlP40338 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gm46313-201ENSMUST00000220463 547 ntBASIC6.27□□□□□ -1.41
VhlP40338 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.27□□□□□ -1.41
VhlP40338 AC122774.1-201ENSMUST00000227703 762 ntBASIC6.27□□□□□ -1.41
VhlP40338 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC6.27□□□□□ -1.41
VhlP40338 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VhlP40338 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
VhlP40338 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.27□□□□□ -1.41
VhlP40338 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.27□□□□□ -1.41
VhlP40338 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VhlP40338 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.27□□□□□ -1.41
VhlP40338 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VhlP40338 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms