Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.21□□□□□ -1.09
Usp4P35123 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.21□□□□□ -1.1
Usp4P35123 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm11220-201ENSMUST00000118844 475 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Gm25780-201ENSMUST00000122528 253 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm23533-201ENSMUST00000157540 245 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.21□□□□□ -1.1
Usp4P35123 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Gm17572-201ENSMUST00000171455 420 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm7393-201ENSMUST00000172650 739 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Mir3473a-201ENSMUST00000175011 78 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 Gm28983-201ENSMUST00000186685 614 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm28150-201ENSMUST00000187305 614 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm8581-201ENSMUST00000188636 890 ntBASIC8.21□□□□□ -1.1
Usp4P35123 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC8.21□□□□□ -1.1
Usp4P35123 Gm28377-201ENSMUST00000189695 720 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm29288-201ENSMUST00000191582 901 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm38051-201ENSMUST00000193740 433 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm19030-201ENSMUST00000194947 552 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm37450-201ENSMUST00000195218 170 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm34701-201ENSMUST00000204213 849 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.21□□□□□ -1.1
Usp4P35123 Gm45525-201ENSMUST00000210800 389 ntBASIC8.21□□□□□ -1.1
Usp4P35123 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.21□□□□□ -1.1
Usp4P35123 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.21□□□□□ -1.1
Usp4P35123 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.21□□□□□ -1.1
Usp4P35123 AC164597.1-201ENSMUST00000226538 514 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp4P35123 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Usp4P35123 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.21□□□□□ -1.1
Usp4P35123 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp4P35123 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Usp4P35123 Gm37210-201ENSMUST00000192484 2004 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Gm5681-201ENSMUST00000189217 1533 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp4P35123 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Gm15154-201ENSMUST00000117590 366 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm13033-201ENSMUST00000117591 1057 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm16149-201ENSMUST00000117631 309 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm8644-201ENSMUST00000118619 596 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm15928-201ENSMUST00000122455 280 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm28186-201ENSMUST00000187447 679 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm28443-201ENSMUST00000189081 698 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm37247-201ENSMUST00000192549 730 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm42696-201ENSMUST00000199859 1142 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm8686-201ENSMUST00000203028 388 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm18329-201ENSMUST00000215832 589 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
Usp4P35123 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 AC110816.1-201ENSMUST00000218559 980 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Gm34165-201ENSMUST00000222012 1174 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 AC134254.4-201ENSMUST00000223086 370 ntBASIC8.2□□□□□ -1.1
Usp4P35123 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp4P35123 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms