Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm43726-201ENSMUST00000199110 775 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm18995-201ENSMUST00000202981 520 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm8479-202ENSMUST00000204366 1070 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.14□□□□□ -1.43
Sdc1P18828 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Sdc1P18828 AC153948.2-201ENSMUST00000218112 505 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sdc1P18828 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sdc1P18828 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 Fabp5l2-201ENSMUST00000072582 408 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sdc1P18828 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 AC122829.1-201ENSMUST00000219743 1631 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sdc1P18828 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sdc1P18828 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Selenot-ps-201ENSMUST00000119098 593 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm14450-201ENSMUST00000119984 240 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm6136-201ENSMUST00000120149 891 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm13049-201ENSMUST00000133196 757 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm23916-201ENSMUST00000158484 399 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm9423-201ENSMUST00000183173 997 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm43212-201ENSMUST00000198208 394 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm43965-201ENSMUST00000203779 789 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 AC158388.3-202ENSMUST00000225517 775 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm7027-201ENSMUST00000086958 862 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sdc1P18828 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms