Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm8165-201ENSMUST00000095981 1404 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Cdx1P18111 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm25501-201ENSMUST00000104429 132 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm12206-201ENSMUST00000119795 601 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm15694-201ENSMUST00000121984 283 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm23195-201ENSMUST00000158814 129 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm17053-201ENSMUST00000163501 495 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm17158-201ENSMUST00000168150 493 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdx1P18111 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm6394-201ENSMUST00000197077 477 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm45877-201ENSMUST00000212110 564 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdx1P18111 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm4120-201ENSMUST00000220456 578 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Hdhd2-207ENSMUST00000147332 1705 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm38272-201ENSMUST00000194431 2400 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Gm28229-201ENSMUST00000188747 2153 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm14094-201ENSMUST00000117717 610 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm12989-201ENSMUST00000122331 731 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdx1P18111 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm8868-201ENSMUST00000173591 577 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Mir6919-201ENSMUST00000185146 62 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm8870-201ENSMUST00000188170 775 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm43013-201ENSMUST00000198216 247 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm44253-201ENSMUST00000203387 628 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm45346-201ENSMUST00000209925 1273 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm7839-201ENSMUST00000210755 673 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms