Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm12685-201ENSMUST00000121702 214 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm8245-201ENSMUST00000182434 987 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm5154-201ENSMUST00000203971 399 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm19256-201ENSMUST00000218550 231 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm12307-201ENSMUST00000120581 590 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm19116-201ENSMUST00000218592 642 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Phactr4-201ENSMUST00000084170 4483 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Snord88a-201ENSMUST00000116723 90 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm11894-201ENSMUST00000121579 328 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm37539-201ENSMUST00000192644 235 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm37135-201ENSMUST00000192652 534 ntBASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Snora35-201ENSMUST00000104579 128 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm12773-201ENSMUST00000120134 587 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm12734-201ENSMUST00000120228 948 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Mir1983-201ENSMUST00000157523 132 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm45608-201ENSMUST00000210948 389 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm26264-201ENSMUST00000083278 159 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 AC121870.2-201ENSMUST00000214343 1870 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm4773-201ENSMUST00000120392 702 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms