Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm28581-201ENSMUST00000186086 2177 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm43080-201ENSMUST00000199006 2643 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm13900-201ENSMUST00000119402 498 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm12321-201ENSMUST00000121485 804 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm11895-201ENSMUST00000122165 467 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm24383-201ENSMUST00000122691 333 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm3344-201ENSMUST00000169610 603 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm19480-201ENSMUST00000185547 667 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col4a6B1AVK5 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm22953-201ENSMUST00000116724 101 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm14863-201ENSMUST00000119648 307 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm12593-201ENSMUST00000120981 743 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm24824-201ENSMUST00000175097 78 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm26784-201ENSMUST00000181666 410 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm44227-201ENSMUST00000203576 241 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms