Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm12378-201ENSMUST00000116171 1461 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm23358-201ENSMUST00000103887 110 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm13683-201ENSMUST00000119497 1076 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm11420-201ENSMUST00000120047 402 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm11258-201ENSMUST00000121086 1218 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm24327-201ENSMUST00000175108 78 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm26980-201ENSMUST00000183321 395 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm18301-201ENSMUST00000185261 888 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm19810-201ENSMUST00000218521 251 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 AC161877.2-201ENSMUST00000226248 545 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 AC154738.1-201ENSMUST00000227054 368 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 AC154227.2-201ENSMUST00000228677 2101 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube3bQ9ES34 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm26377-201ENSMUST00000102184 108 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm15916-201ENSMUST00000118355 736 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm15753-201ENSMUST00000119241 1062 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm8065-201ENSMUST00000164048 605 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm28688-201ENSMUST00000187301 268 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm42667-201ENSMUST00000196132 234 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm16273-201ENSMUST00000202238 268 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 AC154692.1-201ENSMUST00000228314 544 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 AC122877.1-201ENSMUST00000228873 218 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Gm38123-201ENSMUST00000194990 2779 ntBASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Ube3bQ9ES34 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms