Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm5390-201ENSMUST00000119069 1230 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm25437-201ENSMUST00000158282 132 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm8164-201ENSMUST00000169120 1192 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm18797-201ENSMUST00000190809 1174 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm8575-201ENSMUST00000210262 521 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm33778-201ENSMUST00000216884 704 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm6823-201ENSMUST00000120791 1839 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8□□□□□ -1.13
Chmp2aQ9DB34 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Chmp2aQ9DB34 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm25167-201ENSMUST00000104188 120 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm24373-201ENSMUST00000104393 132 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm24071-201ENSMUST00000104520 132 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm13526-201ENSMUST00000117970 189 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm14016-201ENSMUST00000119095 486 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm14450-201ENSMUST00000119984 240 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm11585-201ENSMUST00000120901 569 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm15251-201ENSMUST00000177947 883 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Mir6340-201ENSMUST00000183857 119 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm5920-201ENSMUST00000187390 853 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm9451-201ENSMUST00000188491 604 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm7542-201ENSMUST00000201140 777 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp2aQ9DB34 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms