Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cchcr1Q8K2I2 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm24334-201ENSMUST00000104210 128 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm14414-201ENSMUST00000120833 573 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm12634-201ENSMUST00000122157 992 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Mir1983-201ENSMUST00000157523 132 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm16580-201ENSMUST00000162696 1044 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm10012-202ENSMUST00000170379 372 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm9423-201ENSMUST00000183173 997 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm44451-201ENSMUST00000203767 483 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm18629-201ENSMUST00000222496 884 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 CT010480.3-201ENSMUST00000224712 259 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 AC122356.2-201ENSMUST00000226962 820 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cchcr1Q8K2I2 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cchcr1Q8K2I2 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.02□□□□□ -0.96
Cchcr1Q8K2I2 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cchcr1Q8K2I2 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cchcr1Q8K2I2 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm4918-201ENSMUST00000119420 1084 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm15062-201ENSMUST00000120567 367 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm6292-201ENSMUST00000120712 1095 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Gm45283-201ENSMUST00000210593 628 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 AC137117.3-201ENSMUST00000226265 485 ntBASIC9.02□□□□□ -0.97
Cchcr1Q8K2I2 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms