Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Nol11-202ENSMUST00000106757 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm14836-201ENSMUST00000118567 471 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm12375-201ENSMUST00000119331 921 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm13500-201ENSMUST00000119348 824 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm11483-201ENSMUST00000119839 247 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm14369-201ENSMUST00000121355 285 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm26254-201ENSMUST00000122491 118 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm15251-201ENSMUST00000177947 883 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm36398-201ENSMUST00000192255 696 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm36949-201ENSMUST00000192487 2327 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm30312-201ENSMUST00000194516 696 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm43743-201ENSMUST00000197898 697 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm43849-201ENSMUST00000201086 215 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm43226-201ENSMUST00000202438 259 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 BC060293-201ENSMUST00000207005 1104 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm45042-201ENSMUST00000207377 211 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC154851.2-201ENSMUST00000222172 644 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC192333.4-201ENSMUST00000224269 981 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm45714-201ENSMUST00000211466 2722 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm28359-201ENSMUST00000187470 1322 ntBASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc85bQ6PDY0 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm37818-201ENSMUST00000194952 3169 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm12142-201ENSMUST00000117114 485 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm11865-201ENSMUST00000118093 859 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm13690-201ENSMUST00000118989 285 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm13915-201ENSMUST00000119314 931 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Traj54-201ENSMUST00000165071 54 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 Gm21461-201ENSMUST00000200382 863 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.49□□□□□ -1.05
Ccdc85bQ6PDY0 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms