Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ClpbQ60649 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm45251-201ENSMUST00000209486 1465 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm26014-201ENSMUST00000104405 132 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm14746-201ENSMUST00000120309 741 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm5931-201ENSMUST00000121308 477 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm22424-201ENSMUST00000158527 87 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.45□□□□□ -1.22
ClpbQ60649 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm28980-201ENSMUST00000187877 219 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.45□□□□□ -1.22
ClpbQ60649 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm43008-201ENSMUST00000202346 286 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm9354-201ENSMUST00000209075 468 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm6909-201ENSMUST00000209825 989 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 AC155259.1-201ENSMUST00000214794 477 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm26264-201ENSMUST00000083278 159 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ClpbQ60649 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.45□□□□□ -1.22
ClpbQ60649 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ClpbQ60649 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
ClpbQ60649 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm24334-201ENSMUST00000104210 128 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm23529-201ENSMUST00000104562 132 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm8084-201ENSMUST00000120807 752 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.44□□□□□ -1.22
ClpbQ60649 Mir1962-201ENSMUST00000157516 121 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Scarna17-201ENSMUST00000158064 79 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm25372-201ENSMUST00000158161 255 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm16103-201ENSMUST00000163003 1279 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Mir3060-201ENSMUST00000175339 83 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ClpbQ60649 Gm37436-201ENSMUST00000193842 1085 ntBASIC7.44□□□□□ -1.22
ClpbQ60649 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms