Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm25396-201ENSMUST00000103981 133 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm17184-201ENSMUST00000111864 462 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm13521-201ENSMUST00000118922 866 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm2966-201ENSMUST00000166052 481 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm17204-201ENSMUST00000167936 478 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm6838-201ENSMUST00000172851 582 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm18416-201ENSMUST00000175635 1003 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Zfp572-202ENSMUST00000184208 1078 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm20111-201ENSMUST00000184830 319 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm8925-201ENSMUST00000197212 763 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm44979-201ENSMUST00000206218 287 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC153526.1-201ENSMUST00000219750 190 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC121137.1-201ENSMUST00000225272 602 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 CT010505.1-201ENSMUST00000227026 396 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm23448-201ENSMUST00000083151 104 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-3P97334 AC160637.1-201ENSMUST00000214037 3887 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Gm38263-201ENSMUST00000195879 3059 ntBASIC10.2□□□□□ -0.78
Nkx2-3P97334 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-3P97334 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm37067-201ENSMUST00000195730 1628 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm45512-201ENSMUST00000210432 1553 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm14864-201ENSMUST00000116164 1087 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm13750-201ENSMUST00000117621 465 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm14328-201ENSMUST00000122178 408 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm22275-201ENSMUST00000122470 310 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm9697-201ENSMUST00000147052 997 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm24530-201ENSMUST00000157948 288 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm25557-201ENSMUST00000158084 315 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm23117-201ENSMUST00000158482 108 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm19815-201ENSMUST00000175818 335 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm9931-201ENSMUST00000193584 1185 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm19211-201ENSMUST00000200251 1206 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm43090-201ENSMUST00000202459 314 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Gm44688-201ENSMUST00000209083 537 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC140409.4-201ENSMUST00000215757 538 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC122533.2-201ENSMUST00000223772 545 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC161877.2-201ENSMUST00000226248 545 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC108945.1-201ENSMUST00000226477 94 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC099612.2-201ENSMUST00000226824 721 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 AC136376.1-201ENSMUST00000228496 950 ntBASIC10.19□□□□□ -0.78
Nkx2-3P97334 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-3P97334 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms