Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mir187-201ENSMUST00000083598 61 ntBASIC8.47□□□□□ -1.05
Tpm1P58771 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Tpm1P58771 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Tpm1P58771 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.47□□□□□ -1.05
Tpm1P58771 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Tpm1P58771 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.47□□□□□ -1.05
Tpm1P58771 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.47□□□□□ -1.05
Tpm1P58771 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Tpm1P58771 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Tpm1P58771 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.46□□□□□ -1.05
Tpm1P58771 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Tpm1P58771 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm26012-201ENSMUST00000104411 128 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm15989-201ENSMUST00000121895 498 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 H2afy3-201ENSMUST00000151919 1112 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm8877-201ENSMUST00000172657 655 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm28193-201ENSMUST00000189863 615 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.46□□□□□ -1.06
Tpm1P58771 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm43690-201ENSMUST00000201213 266 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Tpm1P58771 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Tpm1P58771 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Tpm1P58771 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.46□□□□□ -1.06
Tpm1P58771 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Tpm1P58771 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Tpm1P58771 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Mir181d-201ENSMUST00000102383 72 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Tpm1P58771 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm25761-201ENSMUST00000103983 128 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm23706-201ENSMUST00000104369 82 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm12851-201ENSMUST00000117920 421 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm15539-201ENSMUST00000118452 566 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm9164-201ENSMUST00000118700 1014 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm12844-201ENSMUST00000119463 582 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm2214-201ENSMUST00000121333 330 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm22388-201ENSMUST00000158194 248 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm23164-201ENSMUST00000175084 111 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm29517-201ENSMUST00000190744 351 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm37822-201ENSMUST00000192618 1109 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm7369-201ENSMUST00000192738 936 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm44203-201ENSMUST00000203134 307 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Tpm1P58771 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.45□□□□□ -1.06
Tpm1P58771 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms