Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.62□□□□□ -1.03
Rrp1P56183 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rrp1P56183 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.62□□□□□ -1.03
Rrp1P56183 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rrp1P56183 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rrp1P56183 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.62□□□□□ -1.03
Rrp1P56183 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rrp1P56183 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rrp1P56183 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.62□□□□□ -1.03
Rrp1P56183 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rrp1P56183 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rrp1P56183 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.61□□□□□ -1.03
Rrp1P56183 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm13622-201ENSMUST00000120658 433 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm13828-201ENSMUST00000122278 363 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm26048-201ENSMUST00000157305 142 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm26977-201ENSMUST00000183151 996 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm37506-201ENSMUST00000192008 143 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm37247-201ENSMUST00000192549 730 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm4536-201ENSMUST00000209157 542 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm9249-201ENSMUST00000221420 578 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.61□□□□□ -1.03
Rrp1P56183 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Rrp1P56183 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rrp1P56183 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rrp1P56183 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rrp1P56183 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm22150-201ENSMUST00000104447 135 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm11416-201ENSMUST00000119111 863 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm5883-201ENSMUST00000120735 495 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm11474-201ENSMUST00000120814 277 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.6□□□□□ -1.03
Rrp1P56183 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm25455-201ENSMUST00000157946 325 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm22424-201ENSMUST00000158527 87 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm24347-201ENSMUST00000158711 142 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm9286-201ENSMUST00000173586 508 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm25082-201ENSMUST00000177296 255 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm26784-201ENSMUST00000181666 410 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm6750-201ENSMUST00000189273 268 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm29175-201ENSMUST00000189500 402 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm42861-201ENSMUST00000199596 634 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rrp1P56183 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.6□□□□□ -1.03
Rrp1P56183 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rrp1P56183 CT009550.3-201ENSMUST00000228542 455 ntBASIC8.6□□□□□ -1.03
Rrp1P56183 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rrp1P56183 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms