Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm22223-201ENSMUST00000157360 125 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm26321-201ENSMUST00000157740 242 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm17359-201ENSMUST00000164216 778 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm2866-201ENSMUST00000166053 481 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm17074-201ENSMUST00000167284 556 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm26817-201ENSMUST00000180446 339 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm28356-202ENSMUST00000187566 858 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm37526-201ENSMUST00000194640 619 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm19148-201ENSMUST00000197045 429 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 AC113305.1-201ENSMUST00000214664 724 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm19174-201ENSMUST00000216944 956 ntBASIC8.39□□□□□ -1.07
Sox1P53783 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 AC166358.1-201ENSMUST00000220677 105 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC153662.2-201ENSMUST00000221097 120 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC156037.2-201ENSMUST00000221284 112 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 AC166341.6-201ENSMUST00000221528 105 ntBASIC8.39□□□□□ -1.07
Sox1P53783 CT030242.1-201ENSMUST00000221945 125 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC124772.2-201ENSMUST00000222049 154 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC153663.1-201ENSMUST00000222165 120 ntBASIC8.39□□□□□ -1.07
Sox1P53783 CT030157.1-201ENSMUST00000222355 148 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC150661.2-201ENSMUST00000222418 105 ntBASIC8.39□□□□□ -1.07
Sox1P53783 AC127242.2-201ENSMUST00000223138 148 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm26244-201ENSMUST00000083435 164 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm5614-201ENSMUST00000091097 318 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Sox1P53783 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm37464-201ENSMUST00000192431 2220 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Kcnj3-202ENSMUST00000112632 4068 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Itgb2l-201ENSMUST00000000161 2633 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 AC160118.1-201ENSMUST00000214497 2457 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Txnrd1-205ENSMUST00000219368 3622 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.38□□□□□ -1.07
Sox1P53783 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Slc30a6-202ENSMUST00000179074 2171 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm37039-201ENSMUST00000193733 2485 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Sox1P53783 Zfp39-201ENSMUST00000102703 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm12460-201ENSMUST00000117147 357 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm12653-201ENSMUST00000117778 561 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm14283-201ENSMUST00000119763 325 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm14900-201ENSMUST00000120304 733 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm11389-201ENSMUST00000121407 430 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm22275-201ENSMUST00000122470 310 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm6689-201ENSMUST00000130905 481 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC8.38□□□□□ -1.07
Sox1P53783 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.38□□□□□ -1.07
Sox1P53783 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm15275-201ENSMUST00000154752 347 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm17091-201ENSMUST00000163248 357 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm17138-201ENSMUST00000165702 459 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm6472-202ENSMUST00000187973 582 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm5981-201ENSMUST00000199912 487 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms