Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm15081-201ENSMUST00000119794 844 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Gm6142-201ENSMUST00000120290 325 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm25505-201ENSMUST00000157220 246 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC11.68□□□□□ -0.54
Cux1P53564 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 AC151967.1-201ENSMUST00000198146 76 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 CT025639.2-201ENSMUST00000224440 1220 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Gpr87-201ENSMUST00000056898 1080 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cux1P53564 Gm28649-201ENSMUST00000189153 1581 ntBASIC11.68□□□□□ -0.54
Cux1P53564 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cux1P53564 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cux1P53564 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC11.67□□□□□ -0.54
Cux1P53564 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC11.67□□□□□ -0.54
Cux1P53564 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Gm25760-201ENSMUST00000103989 132 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm22927-201ENSMUST00000104268 131 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm26429-201ENSMUST00000104829 110 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm16056-201ENSMUST00000119293 135 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm6428-201ENSMUST00000161062 345 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm24824-201ENSMUST00000175097 78 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC11.67□□□□□ -0.54
Cux1P53564 Mir6357-201ENSMUST00000184246 104 ntBASIC11.67□□□□□ -0.54
Cux1P53564 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC11.67□□□□□ -0.54
Cux1P53564 Gm18907-201ENSMUST00000209719 932 ntBASIC11.67□□□□□ -0.54
Cux1P53564 AC132587.1-201ENSMUST00000220562 166 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Gm6640-201ENSMUST00000120629 1587 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cux1P53564 Gm35172-201ENSMUST00000196037 2649 ntBASIC11.67□□□□□ -0.54
Cux1P53564 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cux1P53564 Gm42648-201ENSMUST00000200774 2505 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cux1P53564 Gm11895-201ENSMUST00000122165 467 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Gm16284-201ENSMUST00000140995 400 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cux1P53564 Gm3585-201ENSMUST00000173438 875 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Gm27014-201ENSMUST00000182658 937 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Mir6241-201ENSMUST00000184225 103 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Gm17965-201ENSMUST00000193904 517 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Gm17834-201ENSMUST00000204322 891 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Gm18955-201ENSMUST00000223173 649 ntBASIC11.66□□□□□ -0.54
Cux1P53564 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 AC154618.2-201ENSMUST00000228299 452 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cux1P53564 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cux1P53564 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cux1P53564 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 AC154747.4-203ENSMUST00000225893 1384 ntBASIC11.66□□□□□ -0.54
Cux1P53564 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 AC091783.1-201ENSMUST00000223614 1613 ntBASIC11.66□□□□□ -0.54
Cux1P53564 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cux1P53564 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cux1P53564 Gm8107-201ENSMUST00000117477 2009 ntBASIC11.65□□□□□ -0.54
Cux1P53564 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Cux1P53564 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC11.65□□□□□ -0.54
Cux1P53564 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC11.65□□□□□ -0.54
Cux1P53564 Gm16113-201ENSMUST00000159629 372 ntBASIC11.65□□□□□ -0.54
Cux1P53564 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms