Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm15576-201ENSMUST00000117806 583 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm6798-201ENSMUST00000119961 360 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm14202-201ENSMUST00000120121 311 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm12754-201ENSMUST00000121908 454 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm17042-201ENSMUST00000167075 1216 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.15□□□□□ -1.42
Sdc1P18828 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm25951-201ENSMUST00000175330 64 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm44908-201ENSMUST00000208610 266 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm29794-201ENSMUST00000218919 1247 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 AC161117.2-201ENSMUST00000221908 451 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 AC126799.1-201ENSMUST00000221976 246 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Tssk4-203ENSMUST00000226497 1235 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 AC115784.1-201ENSMUST00000227687 1010 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Tssk4-206ENSMUST00000228041 1217 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Klk1b1-201ENSMUST00000078835 867 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm22830-201ENSMUST00000083772 130 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sdc1P18828 Gm16026-201ENSMUST00000094774 580 ntBASIC6.15□□□□□ -1.42
Sdc1P18828 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sdc1P18828 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sdc1P18828 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Sdc1P18828 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Gm5975-201ENSMUST00000185256 1399 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Gm5434-202ENSMUST00000222384 1451 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Gm5434-201ENSMUST00000071825 1451 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sdc1P18828 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.15□□□□□ -1.43
Sdc1P18828 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Sdc1P18828 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm7645-201ENSMUST00000119008 788 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm15746-201ENSMUST00000120684 1027 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm7211-201ENSMUST00000172692 1118 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm27972-201ENSMUST00000184720 137 ntBASIC6.14□□□□□ -1.43
Sdc1P18828 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.14□□□□□ -1.43
Sdc1P18828 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC6.14□□□□□ -1.43
Sdc1P18828 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms