Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx1P18111 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx1P18111 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm44874-201ENSMUST00000206586 1542 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 AC100590.1-201ENSMUST00000220318 1357 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
Cdx1P18111 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm18639-201ENSMUST00000210442 1769 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdx1P18111 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.28□□□□□ -1.4
Cdx1P18111 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm11241-201ENSMUST00000117371 896 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm12075-201ENSMUST00000117426 397 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm12445-201ENSMUST00000117947 885 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm12297-201ENSMUST00000121380 979 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm14813-201ENSMUST00000122291 395 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm11953-201ENSMUST00000122352 1003 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm23382-201ENSMUST00000157678 104 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 H2-M10.4-202ENSMUST00000169950 996 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 2900076A07Rik-203ENSMUST00000180879 725 ntTSL 3 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm7132-201ENSMUST00000182302 984 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Cdx1P18111 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm36398-201ENSMUST00000192255 696 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm30312-201ENSMUST00000194516 696 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm40117-201ENSMUST00000198827 369 ntTSL 3 BASIC6.28□□□□□ -1.4
Cdx1P18111 Igkv8-22-201ENSMUST00000199501 367 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm30708-201ENSMUST00000202183 312 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm2734-201ENSMUST00000208561 743 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm5374-202ENSMUST00000222910 314 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 AC139758.2-201ENSMUST00000228380 529 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Olfr1255-201ENSMUST00000057369 933 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Tnip3-207ENSMUST00000212375 1543 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx1P18111 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC6.28□□□□□ -1.4
Cdx1P18111 AC140449.1-201ENSMUST00000214600 1459 ntBASIC6.28□□□□□ -1.4
Cdx1P18111 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.27□□□□□ -1.4
Cdx1P18111 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
Cdx1P18111 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 CT025548.2-201ENSMUST00000226227 1329 ntBASIC6.27□□□□□ -1.41
Cdx1P18111 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx1P18111 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx1P18111 Gm8138-201ENSMUST00000169473 1404 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms