Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Gm8575-201ENSMUST00000210262 521 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.96□□□□□ -0.98
Col1a1P11087 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm18955-201ENSMUST00000223173 649 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm38352-201ENSMUST00000194459 2557 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col1a1P11087 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.95□□□□□ -0.98
Col1a1P11087 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
Col1a1P11087 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col1a1P11087 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm4919-201ENSMUST00000117825 604 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm12955-201ENSMUST00000119689 957 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm6142-201ENSMUST00000120290 325 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm29464-201ENSMUST00000187692 513 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm28117-201ENSMUST00000188472 371 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm37383-201ENSMUST00000191750 745 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm4525-201ENSMUST00000198831 254 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.95□□□□□ -0.98
Col1a1P11087 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm24036-201ENSMUST00000082868 156 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col1a1P11087 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.95□□□□□ -0.98
Col1a1P11087 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC8.95□□□□□ -0.98
Col1a1P11087 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Col1a1P11087 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col1a1P11087 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col1a1P11087 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Col1a1P11087 Gm11416-201ENSMUST00000119111 863 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm16056-201ENSMUST00000119293 135 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm14826-201ENSMUST00000121284 901 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Mir6989-201ENSMUST00000184812 65 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Gm37841-201ENSMUST00000195367 376 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms