Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm37358-201ENSMUST00000195492 479 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm42673-201ENSMUST00000202676 337 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AV026068-220ENSMUST00000224153 1147 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AV026068-224ENSMUST00000224827 928 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Mrpl48-201ENSMUST00000064334 1865 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm15216-201ENSMUST00000118058 277 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm13702-201ENSMUST00000118542 825 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm25969-201ENSMUST00000157166 132 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm21731-201ENSMUST00000079524 489 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Olfr467-201ENSMUST00000084756 927 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm44443-201ENSMUST00000204396 5633 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Rgr-203ENSMUST00000225070 4704 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm11348-201ENSMUST00000118813 318 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm11416-201ENSMUST00000119111 863 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Mir7031-201ENSMUST00000183860 65 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Mir6952-201ENSMUST00000185092 61 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm37609-201ENSMUST00000191778 678 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm4510-201ENSMUST00000218265 427 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 AC122858.1-202ENSMUST00000228290 986 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm14805-201ENSMUST00000120172 340 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm15750-201ENSMUST00000120970 616 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm8540-201ENSMUST00000168952 732 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm34583-203ENSMUST00000202586 454 ntBASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col6a3E9PWQ3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Dpy19l4-201ENSMUST00000084892 6754 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col6a3E9PWQ3 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms