Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm24824-201ENSMUST00000175097 78 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm7369-201ENSMUST00000192738 936 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm37481-201ENSMUST00000195176 403 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm18131-201ENSMUST00000199241 449 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Upk3aQ9JKX8 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm12258-201ENSMUST00000093768 2524 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Npr3-204ENSMUST00000228489 1969 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm12072-201ENSMUST00000118293 715 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm14016-201ENSMUST00000119095 486 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm12844-201ENSMUST00000119463 582 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm11188-201ENSMUST00000122382 388 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm23007-201ENSMUST00000158951 177 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm7436-201ENSMUST00000187229 391 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm5920-201ENSMUST00000187390 853 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm4270-201ENSMUST00000209666 406 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Mir135b-201ENSMUST00000083501 97 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Upk3aQ9JKX8 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Upk3aQ9JKX8 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms